Index

_

__and__() (simudo.mesh.topology.CellRegion method) (simudo.mesh.topology.FacetRegion method) __new__() (simudo.mesh.topology.CellRegion static method) (simudo.mesh.topology.FacetRegion static method) __or__() (simudo.mesh.topology.CellRegion method) (simudo.mesh.topology.FacetRegion method)

__sub__() (simudo.mesh.topology.CellRegion method) (simudo.mesh.topology.FacetRegion method) __xor__() (simudo.mesh.topology.CellRegion method) (simudo.mesh.topology.FacetRegion method)

A

A (simudo.fem.newton_solver.NewtonSolution attribute) abs() (simudo.fem.delayed_form.DelayedForm method) AbsorptionAndRadiativeRecombinationEOPMixin (class in simudo.physics.electro_optical_process) AbsorptionRangesHelper (class in simudo.physics.optical) acquire() (simudo.fem.ffc_jit_lock.LockFile method) adapt() (in module simudo.mesh.refine) adapt_mf() (in module simudo.mesh.refine) AdaptiveStepper (class in simudo.fem.adaptive_stepper) add() (simudo.io.xdmf.PlotAddMixin method) (simudo.util.name_dict.NameDict method) add_band() (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion method) add_BC() (simudo.fem.spatial.Spatial method) add_material_data() (simudo.fem.spatial.Spatial method) add_prior_solution() (simudo.fem.adaptive_stepper.BaseAdaptiveStepper method) add_quantity() (simudo.io.output_writer.MetaExtractorIntegrals method) add_row() (simudo.io.output_writer.MetaCSVWriter method) add_rule() (simudo.fem.spatial.Spatial method) add_surface_flux() (simudo.io.output_writer.MetaExtractorIntegrals method) add_surface_total() (simudo.io.output_writer.MetaExtractorIntegrals method)

add_value_rule() (simudo.fem.spatial.Spatial method) add_volume_total() (simudo.io.output_writer.MetaExtractorIntegrals method) after_modification() (simudo.mesh.construction_helper.InvertibleTransform method) algo_fvs_to_cell_averages() (simudo.fem.spatial.CombinedBoundaryCondition method) algo_get_fv_adjacent_cells() (simudo.fem.spatial.CombinedBoundaryCondition method) allocate_subdomain_range() (simudo.mesh.construction_helper.BaseConstructionHelper method) alpha (simudo.physics.optical.OpticalField attribute), [1] AlwaysTruePredicate (class in simudo.mesh.mesh_entity_predicate) AndMeshEntityPredicate (class in simudo.mesh.mesh_entity_predicate) arg_matplotlib() (in module simudo.plot.plot) as_isolated_method_in_module() (simudo.pyaml.pyaml1.CodeGenerator method) assert_compatible_predicates() (simudo.mesh.mesh_entity_predicate.BaseMeshEntityPredicate class method) assert_gen_reg() (simudo.mesh.domaintag_mshr.DomainTagTest method) assert_rel() (simudo.mesh.domaintag_mshr.DomainTagTest method) assign() (simudo.fem.function_subspace_registry.FunctionSubspaceRegistry method) assign_scalar() (simudo.fem.function_subspace_registry.FunctionSubspaceRegistry method) AssignmentError at_thermal_equilibrium() (simudo.physics.poisson_drift_diffusion.Poisson property) AttrPrefixProxy (class in simudo.util.attrproxy) auto_cache (simudo.pyaml.pyaml1.CodeTag attribute)

B

b (simudo.fem.newton_solver.NewtonSolution attribute) b_norm (simudo.fem.newton_solver.NewtonSolution attribute) BadSimpleSiliconMaterial (class in simudo.physics.material) Band (class in simudo.physics.poisson_drift_diffusion) band (simudo.physics.heterojunction.ThermionicHeterojunction attribute) bands (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion attribute), [1] bands() (simudo.physics.optical.AbsorptionRangesHelper property) BaseAdaptiveStepper (class in simudo.fem.adaptive_stepper) BaseConstructionHelper (class in simudo.mesh.construction_helper) BaseCustomTag (class in simudo.io.h5yaml) (class in simudo.pyaml.pyaml1) BaseDolfinFunctionRenderFrame (class in simudo.fem.plot) BaseDolfinMeshFunctionTag (class in simudo.io.h5yaml) BaseInterval1DTag (class in simudo.mesh.interval1dtag) BaseMeshEntityPredicate (class in simudo.mesh.mesh_entity_predicate)

BaseText (class in simudo.plot.plot) bbox_vecs() (in module simudo.fem.expr) bc_cells (simudo.fem.offset_partitioning.PartitionOffsets attribute), [1] bcs (simudo.fem.spatial.Spatial attribute), [1] Blackbody (class in simudo.util.blackbody) blackbody_I_E() (simudo.util.blackbody.Blackbody method) blackbody_I_E_solar() (simudo.util.blackbody.Blackbody method) blackbody_I_E_solar_on_earth() (simudo.util.blackbody.Blackbody method) Bob (class in simudo.mesh.construction_helper_example) both() (simudo.mesh.topology.FacetRegion method) boundary (simudo.physics.heterojunction.ThermionicHeterojunction attribute) boundary() (simudo.mesh.facet.FacetsManager method) (simudo.mesh.topology.CellRegion method) BoundaryCondition (class in simudo.fem.spatial) break_criteria_cb (simudo.fem.adaptive_stepper.BaseAdaptiveStepper attribute)

C

call() (simudo.io.output_writer.MetaExtractorBandInfo method) (simudo.io.output_writer.MetaExtractorIntegrals method) (simudo.util.todo.TODO method) cartesian_product() (in module simudo.util.cartesian_product) cell_function (simudo.fem.mesh_data.MeshData attribute) cell_function() (simudo.fem.mesh_util.MeshUtil property) cell_function_function (simudo.fem.mesh_util.MeshUtil attribute) cell_predicate_expr_threshold() (in module simudo.mesh.refine) cell_to_cells_adjacency_via_facet (simudo.fem.mesh_data.MeshData attribute) cell_value_internal() (simudo.mesh.facet.FacetsManager method) CellFunctionFunction (class in simudo.fem.expr) CellMidpointExpression (class in simudo.fem.expr) CellRegion (class in simudo.mesh.topology) CellRegions (class in simudo.mesh.topology) cells (simudo.io.output_writer.MetaExtractorIntegrals attribute) cells_at_ix() (simudo.mesh.interval1dtag.Product2DMeshMixin.Product2DMesh method) (simudo.mesh.product2d.Product2DMesh method) CInterval (class in simudo.mesh.interval1dtag) ClassProperty (class in simudo.io.h5yaml) cleanup_prior_solutions() (simudo.fem.adaptive_stepper.BaseAdaptiveStepper method) clear() (simudo.fem.function_subspace_registry.FunctionSubspaceRegistry method) clever_legend() (in module simudo.plot.plot) clip_intervals() (in module simudo.mesh.interval1dtag) close() (simudo.fem.ipython.LineCutPlot method) (simudo.io.csv.LineCutCsvPlot method) (simudo.io.xdmf.XdmfPlot method) code (simudo.pyaml.pyaml1.CodeTag attribute) CodeGenerator (class in simudo.pyaml.pyaml1) CodeTag (class in simudo.pyaml.pyaml1) combined_du_norm (simudo.fem.newton_solver.NewtonSolution attribute) CombinedBoundaryCondition (class in simudo.fem.spatial) CombiningMeshEntityPredicate (class in simudo.mesh.mesh_entity_predicate)

common_load_spatial_data() (in module simudo.example.marti2002.marti2002_plot) compute_facets() (simudo.mesh.construction_helper.BaseConstructionHelper method) compute_meta() (simudo.util.xcsv.XCSVWriter method) compute_V() (simudo.fem.plot.BaseDolfinFunctionRenderFrame method) (simudo.fem.plot.DolfinFunctionRenderFrame method) console_formatter (simudo.util.logging.TypicalLoggingSetup attribute) constantify_if_literal() (in module simudo.fem.expr) constants (simudo.physics.steppers.OpticalIntensityAdaptiveStepper attribute) ConstantStepperMixin (class in simudo.fem.adaptive_stepper) ConstructionHelperIntervalProduct2DMesh (class in simudo.mesh.construction_helper) ConstructionHelperIntervalProduct2DMesh.Interval1DTag (class in simudo.mesh.construction_helper) ConstructionHelperLayeredStructure (class in simudo.mesh.construction_helper) ConstructionHelperManualCellTagging (class in simudo.mesh.construction_helper) ConstructionHelperMshr (class in simudo.mesh.construction_helper) ConstructionHelperPygmsh (class in simudo.mesh.construction_helper) coordinates (simudo.fem.plot.DolfinFunctionRenderFrame attribute) (simudo.fem.plot.DolfinFunctionRenderLineCutFrame attribute) (simudo.mesh.interval1dtag.BaseInterval1DTag attribute) coordinates() (simudo.fem.plot.LineCutter method) copy() (simudo.fem.function_subspace_registry.FunctionSubspaceRegistry method) (simudo.fem.newton_solver.NewtonSolution method) (simudo.mesh.interval1dtag.Product2DMeshMixin.Product2DMesh method) (simudo.mesh.product2d.Product2DMesh method) (simudo.util.name_dict.NameDict method) copy_mpp() (in module simudo.example.marti2002.marti2002_plot) copy_to() (simudo.fem.newton_solver.NewtonSolution method) create_function_from_x_values() (simudo.mesh.interval1dtag.Product2DMeshMixin.Product2DMesh method) (simudo.mesh.product2d.Product2DMesh method) create_plot() (simudo.fem.ipython.LineCutPlot method) create_renderer() (simudo.fem.ipython.LineCutPlot method) create_solution() (simudo.fem.newton_solver.NewtonSolver method) custom_file_open() (simudo.util.pint.XUnitRegistry method)

D

DarkEOPMixin (class in simudo.physics.electro_optical_process) debug_cvs_to_mf() (simudo.mesh.construction_helper.BaseConstructionHelper method) debug_filename() (simudo.util.logging.TypicalLoggingSetup property) debug_fill_with_zero_except_bc (simudo.fem.offset_partitioning.PartitionOffsets attribute) debug_fvs_to_mf() (simudo.mesh.construction_helper.BaseConstructionHelper method) debug_plot() (simudo.mesh.construction_helper.BaseConstructionHelper method) default_assumptions (simudo.fem.sympy_dolfin_printer.DolfinConstant attribute) default_extract_params (simudo.fem.ipython.LineCutPlot attribute) default_value (simudo.fem.plot.DolfinFunctionRenderer attribute) DefaultProblemDataChildMixin (class in simudo.physics.problem_data_child) DelayedForm (class in simudo.fem.delayed_form) delete_attached() (in module simudo.io.h5yaml) delete_units() (simudo.fem.delayed_form.DelayedForm method) depth (simudo.pyaml.pyaml1.CodeGenerator attribute) derivative() (simudo.fem.ufl_extra.ExpM1 method) (simudo.fem.ufl_extra.Ln1P method) df_add_drift_diffusion_terms() (in module simudo.plot.postprocessing) df_mask_IB() (in module simudo.example.marti2002.marti2002_plot) dict (simudo.physics.material.Material attribute) DictAttrProxy (class in simudo.util.attrproxy) dim (simudo.mesh.construction_helper.BaseConstructionHelper attribute) (simudo.mesh.mesh_entity_predicate.BaseMeshEntityPredicate attribute) (simudo.mesh.mesh_entity_predicate.DirectionalEdgeLengthPredicate attribute) DimensionAdapterPredicate (class in simudo.mesh.mesh_entity_predicate) dir_as_prefix() (in module simudo.util.os) DirectionalEdgeLengthPredicate (class in simudo.mesh.mesh_entity_predicate) dirname() (in module simudo.example.marti2002.marti2002) display() (simudo.fem.ipython.DisplayMixin method) DisplayMixin (class in simudo.fem.ipython) distance_factor (simudo.util.blackbody.Blackbody attribute) dless() (simudo.fem.mesh_util.MeshUtil method) do_assemble_system() (simudo.fem.newton_solver.NewtonSolution method) do_before_first_iteration_hook() (simudo.fem.newton_solver.NewtonSolver method) do_init_assembler() (simudo.fem.newton_solver.NewtonSolver method) do_init_parameters() (simudo.fem.newton_solver.NewtonSolver method) do_init_solution() (simudo.fem.newton_solver.NewtonSolver method) do_invalidate_cache() (simudo.fem.newton_solver.NewtonSolution method) do_iteration() (simudo.fem.adaptive_stepper.BaseAdaptiveStepper method) (simudo.fem.newton_solver.NewtonSolver method)

do_linear_solve() (simudo.fem.newton_solver.NewtonSolution method) do_loop() (simudo.fem.adaptive_stepper.BaseAdaptiveStepper method) do_main() (in module simudo.example.pn_benchmark.pn_benchmark_plot) do_post_iteration_hook() (simudo.fem.newton_solver.NewtonSolver method) do_pre_iteration_hook() (simudo.fem.newton_solver.NewtonSolver method) do_single_analysis_summary() (in module simudo.example.pn_benchmark.pn_benchmark_plot) do_update_solution() (simudo.fem.newton_solver.NewtonSolver method) dofs_coordinates() (in module simudo.fem.expr) dolfin (simudo.util.logging.TypicalLoggingSetup attribute) dolfin_interp1d() (in module simudo.fem.expr) DolfinConstant (class in simudo.fem.sympy_dolfin_printer) DolfinFunctionLineCutRenderer (class in simudo.fem.plot) DolfinFunctionRenderer (class in simudo.fem.plot) DolfinFunctionRenderFrame (class in simudo.fem.plot) DolfinFunctionRenderLineCutFrame (class in simudo.fem.plot) DolfinFunctionTag (class in simudo.io.h5yaml) DolfinH5Manager (class in simudo.io.h5yaml) DolfinMeshFunctionBoolTag (class in simudo.io.h5yaml) DolfinMeshFunctionDoubleTag (class in simudo.io.h5yaml) DolfinMeshFunctionIntTag (class in simudo.io.h5yaml) DolfinMeshFunctionSizetTag (class in simudo.io.h5yaml) DolfinMeshTag (class in simudo.io.h5yaml) DolfinObjectTag (class in simudo.io.h5yaml) DolfinPrinter (class in simudo.fem.sympy_dolfin_printer) domain_relationship() (simudo.mesh.domaintag_mshr.DomainTag method) (simudo.mesh.domaintag_mshr.MshrDomainTag method) domain_relationship_tabulate() (simudo.mesh.domaintag_mshr.DomainTag method) DomainTag (class in simudo.mesh.domaintag_mshr) DomainTagTest (class in simudo.mesh.domaintag_mshr) doprint() (simudo.fem.sympy_dolfin_printer.DolfinPrinter method) downproject() (in module simudo.fem.ipython) dst_band (simudo.physics.electro_optical_process.TwoBandEOPMixin attribute) dtypes_dict (simudo.util.xcsv.XCSVReader attribute) (simudo.util.xcsv.XCSVWriter attribute) du_mask_array (simudo.fem.newton_solver.NewtonSolver attribute) du_norm (simudo.fem.newton_solver.NewtonSolution attribute) dump() (in module simudo.io.h5yaml)

E

E (simudo.physics.poisson_drift_diffusion.Poisson attribute) easy_add_band() (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion method) easy_add_electro_optical_process() (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion method) easy_add_electrostatic_potential_BC() (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion method) easy_add_field() (simudo.physics.optical.Optical method) easy_add_two_traps_to_pdd() (simudo.physics.electro_optical_process.TrapEOPMixin class method) easy_auto_pre_solve() (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion method) easy_create_newton_solver() (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion method) effective_density_of_states (simudo.physics.poisson_drift_diffusion.NondegenerateBand attribute) effective_energy_level() (simudo.physics.poisson_drift_diffusion.NondegenerateBand property) efficiency_analysis() (in module simudo.example.fourlayer.fourlayer_example) electro_optical_processes (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion attribute), [1] ElectroOpticalProcess (class in simudo.physics.electro_optical_process) element (simudo.fem.function_space.MixedFunctionSpace attribute) (simudo.mesh.interval1dtag.Product2DMeshMixin.Product2DMesh attribute) (simudo.mesh.product2d.Product2DMesh attribute) element() (simudo.fem.mesh_util.MeshUtil method) emit() (simudo.pyaml.pyaml1.CodeGenerator method) emit_eval_auto_call() (simudo.pyaml.pyaml1.CodeGenerator method) emit_str() (simudo.pyaml.pyaml1.CodeGenerator method) emptyPrinter() (simudo.fem.sympy_dolfin_printer.DolfinPrinter method) enable_radiative_recombination (simudo.physics.electro_optical_process.AbsorptionAndRadiativeRecombinationEOPMixin attribute) energy_level (simudo.physics.poisson_drift_diffusion.IntermediateBand attribute) (simudo.physics.poisson_drift_diffusion.NondegenerateBand attribute) energy_unit() (simudo.physics.optical.AbsorptionRangesHelper property)

ensure_dir() (simudo.io.h5yaml.DolfinH5Manager method) ensure_parent_dir() (simudo.util.logging.TypicalLoggingSetup method) ensure_quantity() (simudo.fem.mesh_util.MeshUtil method) entity_dofs() (simudo.fem.function_subspace_registry.FunctionSubspaceRegistry method) env (simudo.pyaml.pyaml1.CodeTag attribute) escaped (simudo.pyaml.multidict.EscapeMultidictKey attribute) EscapeMultidictKey (class in simudo.pyaml.multidict) eval_cell() (simudo.fem.expr.CellMidpointExpression method) evaluate_function_at_coordinates() (in module simudo.fem.plot) (simudo.fem.plot.BaseDolfinFunctionRenderFrame method) evaluate_topology() (simudo.fem.mesh_data.MeshData method) ExitOptimizerException ExpM1 (class in simudo.fem.ufl_extra) expm1() (in module simudo.fem.ufl_extra) extent (simudo.fem.ipython.LineCutPlot attribute) external (simudo.fem.spatial.BoundaryCondition attribute) extra_iterations (simudo.fem.newton_solver.NewtonSolver attribute) extra_regions (simudo.mesh.construction_helper.ConstructionHelperLayeredStructure attribute) extract() (simudo.fem.plot.BaseDolfinFunctionRenderFrame method) extract_IB_region_only() (in module simudo.example.marti2002.marti2002_plot) extract_jv() (in module simudo.example.marti2002.marti2002_plot) extract_max_abs_IB_current() (in module simudo.example.marti2002.marti2002_plot) extract_params (simudo.fem.plot.BaseDolfinFunctionRenderFrame attribute) extracted_T() (simudo.fem.plot.DolfinFunctionRenderLineCutFrame property) extracted_V (simudo.fem.plot.BaseDolfinFunctionRenderFrame attribute) ExtractedBoundaryCondition (class in simudo.fem.spatial)

F

facet2d_angle() (in module simudo.mesh.facet) facet_function (simudo.fem.mesh_data.MeshData attribute) facet_function() (simudo.fem.mesh_util.MeshUtil property) FacetRegion (class in simudo.mesh.topology) FacetRegions (class in simudo.mesh.topology) facets (simudo.io.output_writer.MetaExtractorIntegrals attribute) facets_manager (simudo.fem.mesh_data.MeshData attribute) facets_name_to_fvs (simudo.fem.mesh_data.MeshData attribute) FacetsManager (class in simudo.mesh.facet) fchainmap() (in module simudo.fem.ipython) fields (simudo.physics.optical.Optical attribute), [1] figclosing() (in module simudo.plot.plot) file_save (simudo.physics.poisson_drift_diffusion.SaveItem attribute) filename_from_key() (simudo.io.h5yaml.DolfinH5Manager method) filter() (simudo.util.logging.NameLevelFilter method) find_globals() (in module simudo.pyaml.astglobals) FindFreeVariablesClassWarning first_cell_value (simudo.mesh.domaintag_mshr.DomainTag attribute) (simudo.mesh.interval1dtag.BaseInterval1DTag attribute) fix_facets_after_subdivision() (simudo.mesh.construction_helper.BaseConstructionHelper method) fix_undefined_facets_after_subdivision() (simudo.mesh.facet.FacetsManager method) fixup_titles() (in module simudo.example.marti2002.marti2002) flip() (simudo.mesh.topology.FacetRegion method) force_single_thread (simudo.fem.ipython.LineCutPlot.RenderingPlot attribute) force_ufl() (in module simudo.fem.expr) format_parameter() (simudo.io.output_writer.OutputWriter method) format_string_system() (in module simudo.util.string_system) frame_class (simudo.fem.plot.DolfinFunctionLineCutRenderer attribute) (simudo.fem.plot.DolfinFunctionRenderer attribute) from_axes() (simudo.plot.plot.LegendText class method) from_existing_mesh_cf() (simudo.mesh.construction_helper.BaseConstructionHelper class method) from_nice_obj() (simudo.fem.newton_solver.NewtonSolver class method)

from_sum() (simudo.fem.delayed_form.DelayedForm class method) from_union() (simudo.fem.function_subspace_registry.FunctionSubspaceRegistry class method) from_yaml() (simudo.io.h5yaml.DolfinObjectTag class method) (simudo.io.h5yaml.FrozenSetTag class method) (simudo.io.h5yaml.PintQTag class method) (simudo.pyaml.pyaml1.BaseCustomTag class method) (simudo.pyaml.pyaml1.YCode2Tag class method) (simudo.pyaml.pyaml1.YCodeTag class method) FrozenSetTag (class in simudo.io.h5yaml) FSRError fullsplit() (in module simudo.util.os) function (simudo.fem.offset_partitioning.PartitionOffsets attribute) Function() (simudo.fem.function_subspace_registry.FunctionSubspaceRegistry method) Function_eval_many() (in module simudo.fem.extra_bindings) function_space (simudo.fem.function_space.MixedFunctionSpace attribute) function_space_cache (simudo.fem.mesh_util.MeshUtil attribute), [1] (simudo.physics.problem_data.ProblemData attribute) function_space_cache() (simudo.fem.function_space.MixedFunctionHelper property) (simudo.physics.problem_data_child.DefaultProblemDataChildMixin property) function_subspace_registry (simudo.fem.mesh_util.MeshUtil attribute), [1] (simudo.physics.problem_data.ProblemData attribute) function_subspace_registry() (simudo.physics.optical.OpticalField property) (simudo.physics.problem_data_child.DefaultProblemDataChildMixin property) function_subspaces (simudo.fem.function_space.MixedFunctionSpace attribute) FunctionSpace() (simudo.fem.function_space_cache.FunctionSpaceCache method) FunctionSpaceCache (class in simudo.fem.function_space_cache) FunctionSubspaceRegistry (class in simudo.fem.function_subspace_registry) FunctionTypeError fv_adjacent_cellavg (simudo.fem.spatial.CombinedBoundaryCondition attribute) fv_adjacent_cells (simudo.fem.spatial.CombinedBoundaryCondition attribute) fv_adjacent_cells_function (simudo.fem.spatial.CombinedBoundaryCondition attribute) fv_set (simudo.fem.spatial.CombinedBoundaryCondition attribute), [1]

G

g (simudo.physics.optical.OpticalField attribute), [1] g() (simudo.physics.poisson_drift_diffusion.Band property) gdim (simudo.mesh.construction_helper.BaseConstructionHelper attribute) generate() (in module simudo.example.marti2002.marti2002) generate_base32_token() (in module simudo.util.base32_token) generate_intersection_regions() (simudo.mesh.domaintag_mshr.DomainTag method) generate_mesh() (simudo.mesh.construction_helper.BaseConstructionHelper method) (simudo.mesh.construction_helper.ConstructionHelperIntervalProduct2DMesh method) (simudo.mesh.construction_helper.ConstructionHelperManualCellTagging method) (simudo.mesh.construction_helper.ConstructionHelperMshr method) (simudo.mesh.construction_helper.ConstructionHelperPygmsh method) geometric_factor (simudo.util.blackbody.Blackbody attribute) GeometricallyExpandingMeshInterval (class in simudo.mesh.interval1dtag) GermaniumMaterial (class in simudo.example.heterojunction.germanium) get() (simudo.fem.spatial.Spatial method) get_absorption_bounds() (simudo.physics.electro_optical_process.RadiativeEOPMixin method) get_alpha() (simudo.physics.electro_optical_process.DarkEOPMixin method) (simudo.physics.electro_optical_process.ElectroOpticalProcess method) (simudo.physics.electro_optical_process.NonOverlappingTopHatBeerLambert method) (simudo.physics.electro_optical_process.NonOverlappingTopHatBeerLambertIB method) get_alpha_by_optical_field() (simudo.physics.electro_optical_process.ElectroOpticalProcess method) get_alpha_pdd_expr() (simudo.physics.optical.OpticalField method) get_band_generation_sign() (simudo.physics.electro_optical_process.ElectroOpticalProcess method) (simudo.physics.electro_optical_process.TwoBandEOPMixin method) get_capture_coefficient() (simudo.physics.electro_optical_process.TrapEOPMixin method) get_constant_alpha() (simudo.physics.electro_optical_process.NonOverlappingTopHatBeerLambert method) get_constant_sigma_opt() (simudo.physics.electro_optical_process.NonOverlappingTopHatBeerLambertIB method) get_current_indent() (simudo.pyaml.pyaml1.CodeGenerator method) get_debug_probe() (simudo.fem.mesh_util.MeshUtil method) get_default_extract_params() (simudo.fem.ipython.LineCutPlot method) get_dict() (simudo.example.heterojunction.germanium.GermaniumMaterial method) (simudo.example.heterojunction.silicon.SiliconMaterial method) (simudo.example.heterojunction.silicongermanium.SiliconGermaniumAlloy method) (simudo.example.marti2002.marti2002.IBSemiconductor method) (simudo.example.marti2002.marti2002.PFrontSurfaceField method) (simudo.example.marti2002.marti2002.Semiconductor method) (simudo.example.pn_benchmark.pn_benchmark.SentaurusComparisonSilicon method) (simudo.example.pn_benchmark.pn_benchmark.SimpleSiliconMaterial method) (simudo.physics.material.BadSimpleSiliconMaterial method) (simudo.physics.material.Material method) (simudo.physics.material.SimpleSiliconMaterial method) get_element() (simudo.fem.function_space.MixedFunctionSpace method) get_essential_bc() (simudo.fem.spatial.CombinedBoundaryCondition method) get_essential_bcs() (simudo.physics.optical.OpticalFieldMSORTE method) (simudo.physics.poisson_drift_diffusion.Band method) (simudo.physics.poisson_drift_diffusion.MixedQflBandMixin method) (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion method) get_frame() (simudo.fem.plot.DolfinFunctionRenderer method) get_full_function_functionspace() (simudo.fem.function_subspace_registry.FunctionSubspaceRegistry method) get_full_function_functionspace_indices() (simudo.fem.function_subspace_registry.FunctionSubspaceRegistry method) get_function_space() (simudo.fem.function_space.MixedFunctionSpace method) (simudo.fem.function_subspace_registry.FunctionSubspaceRegistry method) get_fv_adjacent_cellavg() (simudo.fem.spatial.CombinedBoundaryCondition method) get_g_pdd_expr() (simudo.physics.optical.OpticalField method) get_generation() (simudo.physics.electro_optical_process.ElectroOpticalProcess method) get_generation_optical() (simudo.physics.electro_optical_process.ElectroOpticalProcess method) get_generation_user() (simudo.physics.electro_optical_process.AbsorptionAndRadiativeRecombinationEOPMixin method) (simudo.physics.electro_optical_process.ElectroOpticalProcess method) (simudo.physics.electro_optical_process.NonRadiativeTrap method) (simudo.physics.electro_optical_process.SRHRecombination method)

get_iv_prefix() (simudo.io.output_writer.OutputWriter method) get_last_successful() (simudo.fem.adaptive_stepper.BaseAdaptiveStepper method) get_mapped_parameter() (simudo.fem.adaptive_stepper.ConstantStepperMixin method) get_meta_csv_file() (simudo.io.output_writer.OutputWriter method) get_mixed_bc_pair() (simudo.fem.spatial.Spatial method) get_natural_bc() (simudo.fem.spatial.CombinedBoundaryCondition method) get_object_mpi_comm() (simudo.io.h5yaml.DolfinObjectTag class method) get_omega() (simudo.fem.newton_solver.NewtonSolver method) get_optical_generation() (simudo.physics.electro_optical_process.ElectroOpticalProcess method) get_optical_generation_by_optical_field() (simudo.physics.electro_optical_process.ElectroOpticalProcess method) get_photon_flux_on_pdd_mesh() (simudo.physics.electro_optical_process.ElectroOpticalProcess method) get_plot_prefix() (simudo.io.output_writer.OutputWriter method) get_pyplot() (in module simudo.matplotlib_backend) get_quantum_yield() (simudo.physics.electro_optical_process.ElectroOpticalProcess method) get_quantum_yield_by_optical_field() (simudo.physics.electro_optical_process.ElectroOpticalProcess method) get_radiative_pseudo_capture_coefficient() (simudo.physics.electro_optical_process.NonOverlappingTopHatBeerLambertIB method) get_radiative_recombination() (simudo.physics.electro_optical_process.NonOverlappingTopHatBeerLambert method) (simudo.physics.electro_optical_process.NonOverlappingTopHatBeerLambertIB method) get_renderer_extract_params() (simudo.fem.ipython.LineCutPlot method) get_shockley_read_trap_generation() (simudo.physics.electro_optical_process.TrapEOPMixin method) get_sigma_opt() (simudo.physics.electro_optical_process.NonOverlappingTopHatBeerLambertIB method) get_sigma_th() (simudo.physics.electro_optical_process.TrapEOPMixin method) get_single_essential_bc() (simudo.fem.spatial.Spatial method) get_solution_function() (simudo.physics.optical.OpticalFieldMSORTE method) (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion method) get_spatial_data() (simudo.example.fourlayer.sweep_extraction.SweepData method) get_strandberg_I() (simudo.physics.electro_optical_process.RadiativeEOPMixin method) get_subfunction() (simudo.fem.function_space.WithSubfunctionsMixin method) get_subproblem_children() (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion method) get_subspace_descriptors_for_solution_space() (simudo.physics.optical.OpticalField method) (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion method) get_tau() (simudo.physics.electro_optical_process.SRHRecombination method) (simudo.physics.electro_optical_process.TrapEOPMixin method) get_to_save() (simudo.physics.optical.Optical method) (simudo.physics.optical.OpticalFieldMSORTE method) (simudo.physics.poisson_drift_diffusion.GetToSaveMixin method) (simudo.physics.poisson_drift_diffusion.MixedQflBandMixin method) (simudo.physics.poisson_drift_diffusion.Poisson method) (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion method) get_transition_bounds() (simudo.physics.optical.AbsorptionRangesHelper method) get_transition_lower_bounds() (simudo.physics.optical.AbsorptionRangesHelper method) get_trap_concentration() (simudo.physics.electro_optical_process.TrapEOPMixin method) get_trap_energy_level() (simudo.physics.electro_optical_process.TrapEOPMixin method) get_trap_process_name() (simudo.physics.electro_optical_process.TrapEOPMixin method) get_u1() (simudo.physics.electro_optical_process.TrapEOPMixin method) get_v_th() (simudo.physics.electro_optical_process.TrapEOPMixin method) get_vanilla_bc_pair() (simudo.fem.spatial.Spatial method) get_vector_and_indices() (simudo.fem.function_subspace_registry.FunctionSubspaceRegistry method) get_vector_and_subspace_info() (simudo.fem.function_subspace_registry.FunctionSubspaceRegistry method) get_weak_form() (simudo.physics.optical.OpticalFieldMSORTE method) (simudo.physics.poisson_drift_diffusion.Band method) (simudo.physics.poisson_drift_diffusion.MixedQflBandMixin method) (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion method) GetToSaveMixin (class in simudo.physics.poisson_drift_diffusion) goal_abbreviated() (simudo.physics.problem_data.ProblemData property)

H

has_converged() (simudo.fem.newton_solver.NewtonSolver method)

has_nans (simudo.fem.newton_solver.NewtonSolution attribute) helper_test_roundtrip() (simudo.io.h5yaml.SolutionIOTest method)

I

IB_band_diagram() (in module simudo.example.fourlayer.sweep_extraction) IB_generation_diagram() (in module simudo.example.fourlayer.sweep_extraction) IB_mask() (simudo.example.fourlayer.sweep_extraction.SweepData method) IBSemiconductor (class in simudo.example.marti2002.marti2002) ignore_aliases() (simudo.io.h5yaml.XDumper method) IncompatibleFunctionSpacesError indent_spaces (simudo.pyaml.pyaml1.CodeGenerator attribute) inf_upper_bound() (simudo.physics.optical.AbsorptionRangesHelper property) info_filename() (simudo.util.logging.TypicalLoggingSetup property) init_all() (simudo.fem.ipython.LineCutPlot method) init_fig() (simudo.fem.ipython.LineCutPlot method) init_plots() (simudo.fem.ipython.LineCutPlot method) init_renderers() (simudo.fem.ipython.LineCutPlot method) initialize_from() (simudo.physics.poisson_drift_diffusion.InitializeFromByAttributesMixin method) (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion method) initialize_from_attributes (simudo.physics.poisson_drift_diffusion.MixedQflBandMixin attribute) InitializeFromByAttributesMixin (class in simudo.physics.poisson_drift_diffusion) InitKwSetattr (class in simudo.pyaml.pyaml1) inplace_dict_map() (in module simudo.mesh.construction_helper)

InRadiusCellPredicate (class in simudo.mesh.mesh_entity_predicate) inside_absorption_bounds_conditional() (simudo.physics.electro_optical_process.RadiativeEOPMixin method) IntermediateBand (class in simudo.physics.poisson_drift_diffusion) internal (simudo.fem.spatial.BoundaryCondition attribute) internal() (simudo.mesh.facet.FacetsManager method) internal_facets() (simudo.mesh.topology.CellRegion method) Interval (class in simudo.mesh.interval1dtag) Interval1DTag (class in simudo.mesh.interval1dtag) interval_1d_tag (simudo.mesh.construction_helper.ConstructionHelperIntervalProduct2DMesh attribute) intervals_to_subdomains() (simudo.mesh.interval1dtag.BaseInterval1DTag method) InvertibleTransform (class in simudo.mesh.construction_helper) is_string_column() (simudo.util.xcsv.XCSVBase method) is_ufl_like() (in module simudo.fem.expr) items() (simudo.util.name_dict.NameDict method) iteration (simudo.fem.newton_solver.NewtonSolver attribute), [1] IV_params (class in simudo.example.fourlayer.IV_Analysis) ix_from_vertex() (simudo.mesh.interval1dtag.Product2DMeshMixin.Product2DMesh method) (simudo.mesh.product2d.Product2DMesh method) iy_from_vertex() (simudo.mesh.interval1dtag.Product2DMeshMixin.Product2DMesh method) (simudo.mesh.product2d.Product2DMesh method)

J

j (simudo.physics.poisson_drift_diffusion.Band attribute) json_path (simudo.util.xcsv.XCSVBase attribute) json_path_from_xcsv_path() (simudo.util.xcsv.XCSVBase method)

jv (simudo.example.fourlayer.sweep_extraction.SweepData attribute) jv_curve() (in module simudo.example.fourlayer.fourlayer_example) jv_plot() (in module simudo.example.fourlayer.sweep_extraction)

K

keep_saved_solutions_count (simudo.fem.adaptive_stepper.BaseAdaptiveStepper attribute) key (simudo.physics.poisson_drift_diffusion.Band attribute) (simudo.physics.poisson_drift_diffusion.Poisson attribute), [1]

keys() (simudo.util.name_dict.NameDict method) kl (in module simudo.io.h5yaml) (in module simudo.pyaml.pyaml1) kT() (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion property)

L

LagrangeInterpolator_interpolate_Expression() (in module simudo.fem.extra_bindings) layers (simudo.mesh.construction_helper.ConstructionHelperLayeredStructure attribute) legend_text_object() (simudo.plot.plot.LegendText property) LegendText (class in simudo.plot.plot) line_cut_resolution (simudo.io.output_writer.OutputWriter attribute) LinearTransform (class in simudo.mesh.construction_helper) LineCutCsvPlot (class in simudo.io.csv) LineCutPlot (class in simudo.fem.ipython) LineCutPlot.RenderingPlot (class in simudo.fem.ipython) LineCutter (class in simudo.fem.plot) list (simudo.util.todo.TODO attribute) Ln1P (class in simudo.fem.ufl_extra) ln1p() (in module simudo.fem.ufl_extra)

load() (in module simudo.io.h5yaml) load_definitions() (simudo.util.pint.XUnitRegistry method) load_into() (simudo.io.h5yaml.DolfinObjectTag method) load_json_meta() (simudo.util.xcsv.XCSVReader method) load_pass (simudo.io.h5yaml.DolfinMeshTag attribute) (simudo.io.h5yaml.DolfinObjectTag attribute) load_res() (in module simudo.pyaml.load) local_edge_length() (simudo.mesh.interval1dtag.CInterval method) (simudo.mesh.interval1dtag.GeometricallyExpandingMeshInterval method) LockFile (class in simudo.fem.ffc_jit_lock) log_print() (simudo.fem.newton_solver.NewtonSolver method) logfile_formatter (simudo.util.logging.TypicalLoggingSetup attribute) logger (simudo.fem.newton_solver.NewtonSolver attribute)

M

magnitude() (in module simudo.io.xdmf) (simudo.fem.mesh_util.MeshUtil method) main() (in module simudo.example.heterojunction.het1d_example) (in module simudo.example.pn_benchmark.pn_benchmark) (in module simudo.example.pn_benchmark.pn_benchmark_create_submitfiles) (in module simudo.mesh.construction_helper_example) (simudo.mesh.construction_helper.BaseConstructionHelper method) make_1d_mesh_from_points() (in module simudo.mesh.mesh1d) make_cases() (simudo.fem.expr.CellFunctionFunction method) make_combined_bc() (simudo.fem.spatial.Spatial method) make_compatible_sentaurus() (in module simudo.example.pn_benchmark.pn_benchmark_plot) make_coordinates() (simudo.mesh.interval1dtag.BaseInterval1DTag method) make_fs_plot() (in module simudo.example.marti2002.marti2002_plot) make_function() (simudo.fem.function_space.MixedFunctionSpace method) make_interval_coordinates() (simudo.mesh.interval1dtag.BaseInterval1DTag method) (simudo.mesh.interval1dtag.MinimumCoordinateDistanceMixin method) make_product2d_mesh() (simudo.mesh.interval1dtag.Product2DMeshMixin method) make_solution_mixed_function() (simudo.fem.function_space.MixedFunctionHelper method) make_string_system() (in module simudo.util.string_system) make_subdomains() (simudo.mesh.domaintag_mshr.DomainTag method) make_test_function() (simudo.fem.function_space.MixedFunctionSpace method) make_tolerance_function() (simudo.fem.function_space.MixedFunctionHelper method) make_unit_registry() (in module simudo.util.pint) map (simudo.fem.spatial.CombinedBoundaryCondition attribute), [1] map() (simudo.fem.delayed_form.DelayedForm method) mapping (simudo.fem.sympy_dolfin_printer.DolfinPrinter attribute) (simudo.util.name_dict.NameDict attribute) mark_boundary_facets() (in module simudo.mesh.facet) mark_using_predicate() (in module simudo.mesh.refine) Material (class in simudo.physics.material) material_to_region (simudo.mesh.construction_helper.ConstructionHelperLayeredStructure attribute), [1] material_to_region_map (simudo.fem.mesh_data.MeshData attribute) material_to_region_map() (simudo.fem.spatial.Spatial property) matplotlib_configure_CM_font() (in module simudo.plot.plot) MaxEdgeLengthCellPredicate (class in simudo.mesh.mesh_entity_predicate) mesh (simudo.fem.mesh_data.MeshData attribute) (simudo.mesh.interval1dtag.Product2DMeshMixin.Product2DMesh attribute) (simudo.mesh.product2d.Product2DMesh attribute) mesh() (simudo.fem.function_space.MixedFunctionHelper property) (simudo.fem.mesh_util.MeshUtil property) mesh_bbox() (in module simudo.fem.expr) mesh_data (simudo.fem.mesh_util.MeshUtil attribute) (simudo.mesh.construction_helper.BaseConstructionHelper attribute) (simudo.physics.optical.Optical attribute) (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion attribute) mesh_data() (simudo.fem.spatial.CombinedBoundaryCondition property) (simudo.fem.spatial.Spatial property) (simudo.physics.problem_data_child.DefaultProblemDataChildMixin property) mesh_filename (simudo.mesh.construction_helper.ConstructionHelperPygmsh attribute) mesh_function_map() (in module simudo.mesh.facet) mesh_unit (simudo.fem.mesh_data.MeshData attribute) mesh_unit() (simudo.fem.mesh_util.MeshUtil property) mesh_util (simudo.fem.offset_partitioning.PartitionOffsets attribute) (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion attribute) (simudo.physics.problem_data_child.DefaultProblemDataChildMixin attribute) mesh_util() (simudo.fem.spatial.Spatial property) (simudo.physics.electro_optical_process.ElectroOpticalProcess property) (simudo.physics.optical.OpticalField property) MeshData (class in simudo.fem.mesh_data) meshfunction_type_name (simudo.io.h5yaml.DolfinMeshFunctionBoolTag attribute) (simudo.io.h5yaml.DolfinMeshFunctionDoubleTag attribute) (simudo.io.h5yaml.DolfinMeshFunctionIntTag attribute) (simudo.io.h5yaml.DolfinMeshFunctionSizetTag attribute) MeshUtil (class in simudo.fem.mesh_util) meta (simudo.io.output_writer.MetaExtractorIntegrals attribute) (simudo.util.xcsv.XCSVReader attribute) (simudo.util.xcsv.XCSVWriter attribute) meta_extractors (simudo.io.output_writer.OutputWriter attribute) MetaCSVWriter (class in simudo.io.output_writer) MetaExtractorBandInfo (class in simudo.io.output_writer) MetaExtractorIntegrals (class in simudo.io.output_writer) minimum_coordinate_distance (simudo.mesh.interval1dtag.MinimumCoordinateDistanceMixin attribute) MinimumCoordinateDistanceMixin (class in simudo.mesh.interval1dtag) mixed_function_helper (simudo.physics.optical.OpticalField attribute) (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion attribute), [1] mixed_function_solution_object() (simudo.physics.optical.OpticalField property) mixed_function_space() (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion property) MixedDensityNondegenerateBand (class in simudo.physics.poisson_drift_diffusion) MixedFunctionHelper (class in simudo.fem.function_space) MixedFunctionSpace (class in simudo.fem.function_space) MixedFunctionSpace.MixedFunction (class in simudo.fem.function_space) MixedFunctionSpace.MixedTestFunction (class in simudo.fem.function_space) MixedPoisson (class in simudo.physics.poisson_drift_diffusion) mixedqfl_base_w (simudo.physics.poisson_drift_diffusion.MixedQflBandMixin attribute) mixedqfl_debug_fill_from_boundary (simudo.physics.poisson_drift_diffusion.MixedQflBandMixin attribute) mixedqfl_debug_fill_thresholds (simudo.physics.poisson_drift_diffusion.MixedQflBandMixin attribute) mixedqfl_debug_fill_with_zero_except_bc (simudo.physics.poisson_drift_diffusion.MixedQflBandMixin attribute) mixedqfl_debug_quad_degree_g (simudo.physics.poisson_drift_diffusion.MixedQflBandMixin attribute) mixedqfl_debug_quad_degree_super (simudo.physics.poisson_drift_diffusion.MixedQflBandMixin attribute) mixedqfl_debug_use_bchack (simudo.physics.poisson_drift_diffusion.MixedQflBandMixin attribute) mixedqfl_drift_diffusion_heterojunction_bc_term (simudo.physics.poisson_drift_diffusion.MixedQflBandMixin attribute) mixedqfl_drift_diffusion_heterojunction_facet_region (simudo.physics.poisson_drift_diffusion.MixedQflBandMixin attribute) mixedqfl_drift_diffusion_jump_dS() (simudo.physics.poisson_drift_diffusion.MixedQflBandMixin property) MixedQflBandMixin (class in simudo.physics.poisson_drift_diffusion) MixedQflIntermediateBand (class in simudo.physics.poisson_drift_diffusion) MixedQflNondegenerateBand (class in simudo.physics.poisson_drift_diffusion) mkdirp() (in module simudo.util.os) mobility (simudo.physics.poisson_drift_diffusion.Band attribute) module simudo simudo.example simudo.example.fourlayer.fourlayer simudo.example.fourlayer.fourlayer_example simudo.example.fourlayer.IV_Analysis simudo.example.fourlayer.sweep_extraction simudo.example.heterojunction simudo.example.heterojunction.germanium simudo.example.heterojunction.het1d_example simudo.example.heterojunction.silicon simudo.example.heterojunction.silicongermanium simudo.example.marti2002 simudo.example.marti2002.colors simudo.example.marti2002.marti2002 simudo.example.marti2002.marti2002_plot simudo.example.pn_benchmark simudo.example.pn_benchmark.pn_benchmark simudo.example.pn_benchmark.pn_benchmark_create_submitfiles simudo.example.pn_benchmark.pn_benchmark_plot simudo.example.pn_diode simudo.example.pn_diode.pn_diode simudo.example.pn_diode.pn_diode_plot simudo.fem simudo.fem.adaptive_stepper simudo.fem.assign simudo.fem.delayed_form simudo.fem.dolfin_parameters simudo.fem.expr simudo.fem.extra_bindings simudo.fem.ffc_jit_lock simudo.fem.function_space simudo.fem.function_space_cache simudo.fem.function_subspace_registry simudo.fem.ipython simudo.fem.mesh_data simudo.fem.mesh_util simudo.fem.newton_solver simudo.fem.offset_partitioning simudo.fem.plot simudo.fem.spatial simudo.fem.sympy_dolfin_printer simudo.fem.ufl_extra simudo.io simudo.io.csv simudo.io.h5yaml simudo.io.output_writer simudo.io.xdmf simudo.matplotlib_backend simudo.mesh simudo.mesh.construction_helper simudo.mesh.construction_helper_example simudo.mesh.domaintag_mshr simudo.mesh.facet simudo.mesh.interval1dtag simudo.mesh.mesh1d simudo.mesh.mesh_entity_predicate simudo.mesh.product2d simudo.mesh.pygmsh simudo.mesh.refine simudo.physics simudo.physics.electro_optical_process simudo.physics.heterojunction simudo.physics.material simudo.physics.optical simudo.physics.poisson_drift_diffusion simudo.physics.problem_data simudo.physics.problem_data_child simudo.physics.steppers simudo.plot simudo.plot.matplotlib simudo.plot.pdftoppm simudo.plot.plot simudo.plot.postprocessing simudo.pyaml simudo.pyaml.astglobals simudo.pyaml.helper simudo.pyaml.load simudo.pyaml.multidict simudo.pyaml.pyaml1 simudo.util simudo.util.attrproxy simudo.util.base32_token simudo.util.blackbody simudo.util.cartesian_product simudo.util.latex simudo.util.logging simudo.util.name_dict simudo.util.os simudo.util.pint simudo.util.raise_from simudo.util.raise_from_py3 simudo.util.setattr_init_mixin simudo.util.string_system simudo.util.todo simudo.util.with_default_kwargs simudo.util.xcsv simudo.util.xtimeit

mpp_row (simudo.example.fourlayer.sweep_extraction.SweepData attribute) mshr_make_subdomains() (simudo.mesh.domaintag_mshr.MshrDomainTag method) MshrDomainTag (class in simudo.mesh.domaintag_mshr) multidict_items() (in module simudo.pyaml.multidict) multiplex_setup() (in module simudo.example.fourlayer.fourlayer) mumps_icntl (simudo.fem.newton_solver.NewtonSolution attribute)

N

name (simudo.example.heterojunction.germanium.GermaniumMaterial attribute) (simudo.example.heterojunction.silicon.SiliconMaterial attribute) (simudo.example.heterojunction.silicongermanium.SiliconGermaniumAlloy attribute) (simudo.example.marti2002.marti2002.IBSemiconductor attribute) (simudo.example.marti2002.marti2002.PFrontSurfaceField attribute) (simudo.example.marti2002.marti2002.Semiconductor attribute) (simudo.example.pn_benchmark.pn_benchmark.SentaurusComparisonSilicon attribute) (simudo.example.pn_benchmark.pn_benchmark.SimpleSiliconMaterial attribute) (simudo.physics.electro_optical_process.NonOverlappingTopHatBeerLambert attribute) (simudo.physics.electro_optical_process.NonOverlappingTopHatBeerLambertIB attribute) (simudo.physics.electro_optical_process.NonRadiativeTrap attribute) (simudo.physics.electro_optical_process.SRHRecombination attribute) (simudo.physics.material.BadSimpleSiliconMaterial attribute) (simudo.physics.material.Material attribute), [1] (simudo.physics.material.SimpleSiliconMaterial attribute) (simudo.physics.poisson_drift_diffusion.Band attribute) (simudo.physics.poisson_drift_diffusion.SaveItem attribute) name() (simudo.physics.optical.OpticalField property) (simudo.physics.poisson_drift_diffusion.Band property) NameDict (class in simudo.util.name_dict) NameLevelFilter (class in simudo.util.logging) NandMeshEntityPredicate (class in simudo.mesh.mesh_entity_predicate) nargs (simudo.fem.sympy_dolfin_printer.DolfinConstant attribute)

needs_load_into (simudo.io.h5yaml.DolfinObjectTag attribute) new() (simudo.io.csv.LineCutCsvPlot method) (simudo.io.xdmf.XdmfPlot method) new_independent_function() (simudo.fem.function_subspace_registry.FunctionSubspaceRegistry method) new_jit() (in module simudo.fem.ffc_jit_lock) NewtonBailoutException NewtonSolution (class in simudo.fem.newton_solver) NewtonSolver (class in simudo.fem.newton_solver) NewtonSolverLogDamping (class in simudo.fem.newton_solver) NewtonSolverMaxDu (class in simudo.fem.newton_solver) non_overlapping_energy_ranges() (simudo.util.blackbody.Blackbody method) NondegenerateBand (class in simudo.physics.poisson_drift_diffusion) NonequilibriumCoupledConstantStepper (class in simudo.physics.steppers) NonequilibriumCoupledStepper (class in simudo.physics.steppers) NonOverlappingTopHatBeerLambert (class in simudo.physics.electro_optical_process) NonOverlappingTopHatBeerLambertIB (class in simudo.physics.electro_optical_process) NonRadiativeTrap (class in simudo.physics.electro_optical_process) null() (simudo.mesh.topology.CellRegion static method) (simudo.mesh.topology.FacetRegion static method) number_of_states (simudo.physics.poisson_drift_diffusion.IntermediateBand attribute) nX (simudo.mesh.interval1dtag.Product2DMeshMixin.Product2DMesh attribute) (simudo.mesh.product2d.Product2DMesh attribute) nY (simudo.mesh.interval1dtag.Product2DMeshMixin.Product2DMesh attribute) (simudo.mesh.product2d.Product2DMesh attribute)

O

obj_eq() (simudo.util.name_dict.NameDict method) obj_to_key() (simudo.util.name_dict.NameDict method) offset_partitioning_bc_cells (simudo.fem.spatial.CombinedBoundaryCondition attribute) open() (simudo.io.h5yaml.DolfinH5Manager method) opportunistic_assign() (in module simudo.fem.assign) Optical (class in simudo.physics.optical) optical (simudo.physics.electro_optical_process.ElectroOpticalProcess attribute) (simudo.physics.problem_data.ProblemData attribute), [1] optical_properties_table() (simudo.example.heterojunction.silicon.SiliconMaterial method)

OpticalField (class in simudo.physics.optical) OpticalFieldMSORTE (class in simudo.physics.optical) OpticalIntensityAdaptiveStepper (class in simudo.physics.steppers) optimizer() (in module simudo.example.fourlayer.fourlayer_example) OrMeshEntityPredicate (class in simudo.mesh.mesh_entity_predicate) out_function (simudo.fem.offset_partitioning.PartitionOffsets attribute), [1] outdir_path_helper() (in module simudo.util.os) output_writer (simudo.fem.adaptive_stepper.BaseAdaptiveStepper attribute) OutputWriter (class in simudo.io.output_writer)

P

p (simudo.mesh.construction_helper.BaseConstructionHelper attribute) parameter (simudo.fem.adaptive_stepper.BaseAdaptiveStepper attribute), [1] parameter_name (simudo.io.output_writer.OutputWriter attribute) parameter_start_value (simudo.fem.adaptive_stepper.BaseAdaptiveStepper attribute) parameter_target_values (simudo.fem.adaptive_stepper.BaseAdaptiveStepper attribute) (simudo.physics.steppers.OpticalIntensityAdaptiveStepper attribute) parameter_unit (simudo.fem.adaptive_stepper.ConstantStepperMixin attribute) (simudo.physics.steppers.OpticalIntensityAdaptiveStepper attribute) parameter_value (simudo.io.output_writer.MetaExtractorIntegrals attribute) params (simudo.example.fourlayer.sweep_extraction.SweepData attribute) parse_kv() (in module simudo.util.os) PartitionOffsets (class in simudo.fem.offset_partitioning) pdd (simudo.io.output_writer.MetaExtractorIntegrals attribute) (simudo.physics.electro_optical_process.ElectroOpticalProcess attribute) (simudo.physics.poisson_drift_diffusion.Band attribute) (simudo.physics.poisson_drift_diffusion.Poisson attribute) (simudo.physics.problem_data.ProblemData attribute), [1] pdd() (simudo.physics.material.Material property) (simudo.physics.optical.OpticalField property) pdftoppm() (in module simudo.plot.pdftoppm) percentile_update_limits() (in module simudo.plot.plot) permittivity() (simudo.physics.poisson_drift_diffusion.Poisson property) PFrontSurfaceField (class in simudo.example.marti2002.marti2002) Phi (simudo.physics.optical.OpticalField attribute) phi (simudo.physics.poisson_drift_diffusion.Poisson attribute) Phi_pddproj (simudo.physics.optical.OpticalField attribute), [1] Phi_pddproj_clipped (simudo.physics.optical.OpticalField attribute) Phi_pddproj_clipped() (simudo.physics.optical.OpticalField property) Phi_pddproj_space (simudo.physics.optical.Optical attribute) Phi_scale (simudo.physics.optical.Optical attribute), [1] phiqfl() (simudo.physics.poisson_drift_diffusion.Band property) phiqfl_to_u() (simudo.physics.poisson_drift_diffusion.Band method) photon_flux_integral() (simudo.util.blackbody.Blackbody method) photon_flux_integral_on_earth() (simudo.util.blackbody.Blackbody method) PintQTag (class in simudo.io.h5yaml) plot01() (in module simudo.plot.plot) plot_1d (simudo.io.output_writer.OutputWriter attribute) plot_bands() (in module simudo.example.marti2002.marti2002_plot) plot_cmp_current() (in module simudo.example.pn_benchmark.pn_benchmark_plot) plot_cmp_density() (in module simudo.example.pn_benchmark.pn_benchmark_plot) plot_current() (in module simudo.example.marti2002.marti2002_plot) plot_detail_j() (in module simudo.example.marti2002.marti2002_plot) plot_detail_j_subplot() (in module simudo.example.marti2002.marti2002_plot) plot_drift_diffusion_currents() (in module simudo.example.pn_benchmark.pn_benchmark_plot) plot_fs() (in module simudo.example.marti2002.marti2002_plot) plot_g() (in module simudo.example.marti2002.marti2002_plot) plot_iv (simudo.io.output_writer.OutputWriter attribute) plot_jv() (in module simudo.example.marti2002.marti2002_plot) plot_jv_old() (in module simudo.example.marti2002.marti2002_plot) plot_main() (in module simudo.example.marti2002.marti2002_plot)

plot_mesh (simudo.io.output_writer.OutputWriter attribute) plot_offset_partitioning() (in module simudo.example.pn_benchmark.pn_benchmark_plot) plot_Phi() (in module simudo.example.marti2002.marti2002_plot) plot_qfl() (in module simudo.example.marti2002.marti2002_plot) plot_subcurrents() (in module simudo.example.marti2002.marti2002_plot) PlotAddMixin (class in simudo.io.xdmf) plotobj (simudo.fem.ipython.LineCutPlot.RenderingPlot attribute) point_to_array() (in module simudo.fem.expr) Poisson (class in simudo.physics.poisson_drift_diffusion) poisson (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion attribute), [1] PoissonDriftDiffusion (class in simudo.physics.poisson_drift_diffusion) post_iteration_hook (simudo.physics.electro_optical_process.ElectroOpticalProcess attribute), [1] powerset() (in module simudo.mesh.domaintag_mshr) pre_first_iteration_hook (simudo.physics.electro_optical_process.ElectroOpticalProcess attribute), [1] pre_iteration_hook (simudo.physics.electro_optical_process.ElectroOpticalProcess attribute), [1] predicate_to_meshfunction() (in module simudo.mesh.refine) prefix (simudo.io.output_writer.MetaExtractorBandInfo attribute) (simudo.io.output_writer.MetaExtractorIntegrals attribute), [1] prepare() (simudo.mesh.mesh_entity_predicate.BaseMeshEntityPredicate method) (simudo.mesh.mesh_entity_predicate.CombiningMeshEntityPredicate method) (simudo.mesh.mesh_entity_predicate.DimensionAdapterPredicate method) (simudo.mesh.mesh_entity_predicate.DirectionalEdgeLengthPredicate method) printmethod (simudo.fem.sympy_dolfin_printer.DolfinPrinter attribute) prior_solutions (simudo.fem.adaptive_stepper.BaseAdaptiveStepper attribute) prior_solutions_idx_saved_solution (simudo.fem.adaptive_stepper.BaseAdaptiveStepper attribute) prior_solutions_idx_successful (simudo.fem.adaptive_stepper.BaseAdaptiveStepper attribute) problem_data (simudo.physics.optical.Optical attribute) (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion attribute) ProblemData (class in simudo.physics.problem_data) process() (simudo.mesh.pygmsh.PygmshMakeRegions method) (simudo.pyaml.pyaml1.CodeGenerator method) process_class() (simudo.pyaml.pyaml1.CodeGenerator method) process_code() (simudo.pyaml.pyaml1.CodeGenerator method) process_eval() (simudo.pyaml.pyaml1.CodeGenerator method) process_string_column() (simudo.util.xcsv.XCSVReader method) product2d_mesh (simudo.mesh.interval1dtag.Product2DMeshMixin attribute) product2d_Ys (simudo.mesh.construction_helper.ConstructionHelperIntervalProduct2DMesh attribute) (simudo.mesh.interval1dtag.Product2DMeshMixin attribute) Product2DMesh (class in simudo.mesh.product2d) Product2DMeshMixin (class in simudo.mesh.interval1dtag) Product2DMeshMixin.Product2DMesh (class in simudo.mesh.interval1dtag) PYAML_EVAL() (simudo.pyaml.helper.PyamlGetAttr method) PYAML_get_direct_env() (simudo.pyaml.helper.PyamlEnv method) PYAML_get_env() (simudo.pyaml.helper.PyamlEnv method) pyaml_to_python() (simudo.pyaml.pyaml1.CodeGenerator class method) PyamlBase (class in simudo.pyaml.helper) PyamlEnv (class in simudo.pyaml.helper) PyamlGetAttr (class in simudo.pyaml.helper) pygmsh_generate_mesh() (simudo.mesh.construction_helper.ConstructionHelperPygmsh method) PygmshMakeRegions (class in simudo.mesh.pygmsh)

Q

q (simudo.fem.newton_solver.NewtonSolution attribute)

qfl (simudo.physics.poisson_drift_diffusion.Band attribute) qfl_to_u() (simudo.physics.poisson_drift_diffusion.Band method)

R

RadiativeEOPMixin (class in simudo.physics.electro_optical_process) raise_from() (in module simudo.util.raise_from) (in module simudo.util.raise_from_py3) read_csv() (simudo.util.xcsv.XCSV class method) (simudo.util.xcsv.XCSVReader method) read_xcsv() (in module simudo.util.xcsv) reader_class (simudo.util.xcsv.XCSV attribute) rect() (simudo.mesh.domaintag_mshr.DomainTagTest method) refine_forever() (in module simudo.mesh.refine) refine_subdomains() (simudo.mesh.construction_helper.BaseConstructionHelper method) reg_band (simudo.physics.electro_optical_process.TrapEOPMixin attribute), [1] region_ds_and_dS() (simudo.fem.mesh_util.MeshUtil method) region_dx() (simudo.fem.mesh_util.MeshUtil method) region_name_to_cvs (simudo.fem.mesh_data.MeshData attribute) region_oriented_dS() (simudo.fem.mesh_util.MeshUtil method) region_to_subdomain() (simudo.mesh.domaintag_mshr.DomainTag method) register() (simudo.fem.function_subspace_registry.FunctionSubspaceRegistry method) (simudo.physics.heterojunction.ThermionicHeterojunction method) (simudo.physics.material.Material method)

register_in_dumper() (simudo.io.h5yaml.BaseCustomTag class method) (simudo.pyaml.pyaml1.BaseCustomTag class method) register_in_loader() (simudo.io.h5yaml.BaseCustomTag class method) (simudo.pyaml.pyaml1.BaseCustomTag class method) rel_du_norm (simudo.fem.newton_solver.NewtonSolution attribute) release() (simudo.fem.ffc_jit_lock.LockFile method) (simudo.fem.sympy_dolfin_printer.DolfinConstant class method) replace() (simudo.util.name_dict.NameDict method) require_natural (simudo.fem.spatial.BoundaryCondition attribute) reset_parameter_to_last_successful() (simudo.fem.adaptive_stepper.BaseAdaptiveStepper method) result (simudo.pyaml.pyaml1.CodeGenerator attribute) reverse_map (simudo.fem.spatial.CombinedBoundaryCondition attribute), [1] rho (simudo.physics.poisson_drift_diffusion.Poisson attribute) robjs (simudo.mesh.construction_helper.BaseConstructionHelper attribute) run() (in module simudo.example.fourlayer.fourlayer) (in module simudo.example.marti2002.marti2002) (in module simudo.example.pn_diode.pn_diode) (simudo.mesh.construction_helper.BaseConstructionHelper method)

S

savefig() (in module simudo.plot.plot) SaveItem (class in simudo.physics.poisson_drift_diffusion) scalar_function_to_Expression() (in module simudo.fem.expr) ScaleDolfinObjectTag (class in simudo.io.h5yaml) ScaleMixin (class in simudo.io.h5yaml) sci_to_latex() (in module simudo.example.pn_benchmark.pn_benchmark_plot) sci_to_latex1() (in module simudo.util.latex) Semiconductor (class in simudo.example.marti2002.marti2002) SentaurusComparisonSilicon (class in simudo.example.pn_benchmark.pn_benchmark) set_problem() (simudo.fem.newton_solver.NewtonSolver method) SetattrInitMixin (class in simudo.util.setattr_init_mixin) setup() (simudo.util.logging.TypicalLoggingSetup method) setup_dolfin_loglevel() (simudo.util.logging.TypicalLoggingSetup method) setup_dolfin_parameters() (in module simudo.fem.dolfin_parameters) setup_filters() (simudo.util.logging.TypicalLoggingSetup method) setup_handlers() (simudo.util.logging.TypicalLoggingSetup method) setup_logging() (simudo.util.logging.TypicalLoggingSetup method) shortcircuitbanddiagram() (in module simudo.example.fourlayer.fourlayer_example) should_extract (simudo.fem.spatial.BoundaryCondition attribute) should_stop() (simudo.fem.newton_solver.NewtonSolver method) should_stop_real() (simudo.fem.newton_solver.NewtonSolver method) sign (simudo.physics.poisson_drift_diffusion.Band attribute) SiliconGermaniumAlloy (class in simudo.example.heterojunction.silicongermanium) SiliconMaterial (class in simudo.example.heterojunction.silicon) SimpleSiliconMaterial (class in simudo.example.pn_benchmark.pn_benchmark) (class in simudo.physics.material) simudo module simudo.example module simudo.example.fourlayer.fourlayer module simudo.example.fourlayer.fourlayer_example module simudo.example.fourlayer.IV_Analysis module simudo.example.fourlayer.sweep_extraction module simudo.example.heterojunction module simudo.example.heterojunction.germanium module simudo.example.heterojunction.het1d_example module simudo.example.heterojunction.silicon module simudo.example.heterojunction.silicongermanium module simudo.example.marti2002 module simudo.example.marti2002.colors module simudo.example.marti2002.marti2002 module simudo.example.marti2002.marti2002_plot module simudo.example.pn_benchmark module simudo.example.pn_benchmark.pn_benchmark module simudo.example.pn_benchmark.pn_benchmark_create_submitfiles module simudo.example.pn_benchmark.pn_benchmark_plot module simudo.example.pn_diode module simudo.example.pn_diode.pn_diode module simudo.example.pn_diode.pn_diode_plot module simudo.fem module simudo.fem.adaptive_stepper module simudo.fem.assign module simudo.fem.delayed_form module simudo.fem.dolfin_parameters module simudo.fem.expr module simudo.fem.extra_bindings module simudo.fem.ffc_jit_lock module simudo.fem.function_space module simudo.fem.function_space_cache module simudo.fem.function_subspace_registry module simudo.fem.ipython module simudo.fem.mesh_data module simudo.fem.mesh_util module simudo.fem.newton_solver module simudo.fem.offset_partitioning module simudo.fem.plot module simudo.fem.spatial module simudo.fem.sympy_dolfin_printer module simudo.fem.ufl_extra module simudo.io module simudo.io.csv module simudo.io.h5yaml module simudo.io.output_writer module simudo.io.xdmf module simudo.matplotlib_backend module simudo.mesh module simudo.mesh.construction_helper module simudo.mesh.construction_helper_example module simudo.mesh.domaintag_mshr module simudo.mesh.facet module simudo.mesh.interval1dtag module simudo.mesh.mesh1d module simudo.mesh.mesh_entity_predicate module simudo.mesh.product2d module

simudo.mesh.pygmsh module simudo.mesh.refine module simudo.physics module simudo.physics.electro_optical_process module simudo.physics.heterojunction module simudo.physics.material module simudo.physics.optical module simudo.physics.poisson_drift_diffusion module simudo.physics.problem_data module simudo.physics.problem_data_child module simudo.physics.steppers module simudo.plot module simudo.plot.matplotlib module simudo.plot.pdftoppm module simudo.plot.plot module simudo.plot.postprocessing module simudo.pyaml module simudo.pyaml.astglobals module simudo.pyaml.helper module simudo.pyaml.load module simudo.pyaml.multidict module simudo.pyaml.pyaml1 module simudo.util module simudo.util.attrproxy module simudo.util.base32_token module simudo.util.blackbody module simudo.util.cartesian_product module simudo.util.latex module simudo.util.logging module simudo.util.name_dict module simudo.util.os module simudo.util.pint module simudo.util.raise_from module simudo.util.raise_from_py3 module simudo.util.setattr_init_mixin module simudo.util.string_system module simudo.util.todo module simudo.util.with_default_kwargs module simudo.util.xcsv module simudo.util.xtimeit module simudo_multiplexer() (in module simudo.example.fourlayer.fourlayer_example) size (simudo.fem.ipython.LineCutPlot.RenderingPlot attribute) (simudo.fem.newton_solver.NewtonSolution attribute) solution (simudo.fem.adaptive_stepper.BaseAdaptiveStepper attribute) (simudo.io.output_writer.MetaExtractorIntegrals attribute) solution_class (simudo.fem.newton_solver.NewtonSolver attribute) solution_function() (simudo.fem.function_space.MixedFunctionHelper property) solution_mixed_function_data (simudo.fem.function_space.MixedFunctionHelper attribute) solution_mixed_space (simudo.fem.function_space.MixedFunctionHelper attribute) solution_plot() (in module simudo.io.output_writer) solution_subspace_descriptors() (simudo.fem.function_space.WithSubfunctionsMixin property) solution_test_function() (simudo.fem.function_space.MixedFunctionHelper property) SolutionIOTest (class in simudo.io.h5yaml) solve() (simudo.fem.newton_solver.NewtonSolver method) solver_save (simudo.physics.poisson_drift_diffusion.SaveItem attribute) space (simudo.mesh.interval1dtag.Product2DMeshMixin.Product2DMesh attribute) (simudo.mesh.product2d.Product2DMesh attribute) space() (simudo.fem.mesh_util.MeshUtil property) Spatial (class in simudo.fem.spatial) spatial (simudo.physics.optical.Optical attribute), [1] (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion attribute) spatial() (simudo.physics.optical.OpticalField property) split() (simudo.fem.function_space.MixedFunctionSpace method) src_band (simudo.physics.electro_optical_process.TwoBandEOPMixin attribute) SRHRecombination (class in simudo.physics.electro_optical_process) step_size (simudo.fem.adaptive_stepper.BaseAdaptiveStepper attribute), [1] (simudo.physics.steppers.OpticalIntensityAdaptiveStepper attribute) (simudo.physics.steppers.VoltageStepper attribute) stepper (simudo.io.output_writer.OutputWriter attribute) stepper_rel_tol (simudo.fem.adaptive_stepper.BaseAdaptiveStepper attribute), [1] StepperError str_error() (simudo.fem.newton_solver.NewtonSolution method) stream_console (simudo.util.logging.TypicalLoggingSetup attribute) stream_debug (simudo.util.logging.TypicalLoggingSetup attribute) stream_info (simudo.util.logging.TypicalLoggingSetup attribute) string (simudo.plot.plot.BaseText attribute) string() (simudo.plot.plot.LegendText property) (simudo.plot.plot.TitleText property) string_columns (simudo.util.xcsv.XCSVReader attribute) (simudo.util.xcsv.XCSVWriter attribute) string_prefix (simudo.util.xcsv.XCSVReader attribute) string_prefix() (simudo.util.xcsv.XCSVWriter property) string_prefix_re (simudo.util.xcsv.XCSVReader attribute) subdomain (simudo.physics.poisson_drift_diffusion.Band attribute) subdomain_internal_facets() (simudo.mesh.topology.CellRegion method) SubdomainCellPredicate (class in simudo.mesh.mesh_entity_predicate) subdomains (simudo.mesh.interval1dtag.BaseInterval1DTag attribute) subfunction_prefix() (simudo.fem.function_space.WithSubfunctionsMixin method) subfunctions_info (simudo.physics.poisson_drift_diffusion.Band attribute) subgap_generation_mismatch_diagram() (in module simudo.example.fourlayer.sweep_extraction) subgap_mismatch() (in module simudo.example.fourlayer.sweep_extraction) submain() (in module simudo.example.pn_benchmark.pn_benchmark) submitfile_to_title() (in module simudo.example.marti2002.marti2002) subplots() (in module simudo.plot.plot) subspace_descriptors_dict (simudo.fem.function_space.MixedFunctionSpace attribute) summary_analysis() (in module simudo.example.pn_benchmark.pn_benchmark_plot) SweepData (class in simudo.example.fourlayer.sweep_extraction) sympy_to_ufl() (in module simudo.fem.sympy_dolfin_printer) sympy_to_ufl_base() (in module simudo.fem.sympy_dolfin_printer)

T

t_bounds (simudo.fem.plot.LineCutter attribute) tag_to_cell_values (simudo.mesh.interval1dtag.BaseInterval1DTag attribute) tau_from_spatial (simudo.physics.electro_optical_process.SRHRecombination attribute) temperature() (simudo.physics.material.Material property) (simudo.physics.poisson_drift_diffusion.PoissonDriftDiffusion property) test_domain_relationship() (simudo.mesh.domaintag_mshr.DomainTagTest method) test_generate_possibilities() (simudo.mesh.domaintag_mshr.DomainTagTest method) test_roundtrip() (simudo.io.h5yaml.SolutionIOTest method) test_roundtrip_with_dedup() (simudo.io.h5yaml.SolutionIOTest method) thermal_equilibrium_phi (simudo.physics.poisson_drift_diffusion.Poisson attribute), [1] ThermionicHeterojunction (class in simudo.physics.heterojunction) thresholds (simudo.fem.offset_partitioning.PartitionOffsets attribute), [1] timestamp (simudo.io.csv.LineCutCsvPlot attribute) (simudo.io.xdmf.XdmfPlot attribute) TitleText (class in simudo.plot.plot) to_csv() (simudo.util.xcsv.XCSV class method) (simudo.util.xcsv.XCSVWriter method) to_save_objects (simudo.fem.adaptive_stepper.AdaptiveStepper attribute) (simudo.physics.steppers.NonequilibriumCoupledStepper attribute) to_ufl() (simudo.fem.delayed_form.DelayedForm method) to_xcsv() (in module simudo.util.xcsv)

to_yaml() (simudo.io.h5yaml.DolfinObjectTag class method) (simudo.io.h5yaml.FrozenSetTag class method) (simudo.io.h5yaml.PintQTag class method) (simudo.pyaml.pyaml1.BaseCustomTag class method) TODO (class in simudo.util.todo) topology_standard_contacts() (in module simudo.example.heterojunction.het1d_example) (in module simudo.example.marti2002.marti2002) (in module simudo.example.pn_benchmark.pn_benchmark) (in module simudo.example.pn_diode.pn_diode) total_intensity_on_earth() (simudo.util.blackbody.Blackbody method) transform() (simudo.mesh.construction_helper.InvertibleTransform method) transform_coordinates() (simudo.mesh.construction_helper.InvertibleTransform method) (simudo.mesh.construction_helper.LinearTransform method) trap_band (simudo.physics.electro_optical_process.SRHRecombination attribute) (simudo.physics.electro_optical_process.TrapEOPMixin attribute) trap_spatial_get() (simudo.physics.electro_optical_process.TrapEOPMixin method) TrapEOPMixin (class in simudo.physics.electro_optical_process) truncate (simudo.util.logging.TypicalLoggingSetup attribute) Ts (simudo.fem.plot.DolfinFunctionRenderLineCutFrame attribute) tuple_to_point() (in module simudo.fem.expr) TwoBandEOPMixin (class in simudo.physics.electro_optical_process) TypicalLoggingSetup (class in simudo.util.logging)

U

u (simudo.physics.poisson_drift_diffusion.Band attribute) u() (simudo.util.blackbody.Blackbody property) u_to_phiqfl() (simudo.physics.poisson_drift_diffusion.Band method) u_to_qfl() (simudo.physics.poisson_drift_diffusion.Band method) ufl_cell() (simudo.fem.mesh_util.MeshUtil property) unduplicate_msh3_cells() (simudo.mesh.pygmsh.PygmshMakeRegions method) unit_registry (simudo.fem.mesh_util.MeshUtil attribute), [1] unit_registry() (simudo.fem.adaptive_stepper.ConstantStepperMixin property) (simudo.physics.electro_optical_process.ElectroOpticalProcess property) (simudo.physics.material.Material property) (simudo.physics.optical.AbsorptionRangesHelper property) (simudo.physics.optical.OpticalField property) (simudo.physics.problem_data_child.DefaultProblemDataChildMixin property) units() (simudo.fem.mesh_util.MeshUtil method) unsigned() (simudo.mesh.topology.FacetRegion method) untransform() (simudo.mesh.construction_helper.InvertibleTransform method) untransform_coordinates() (simudo.mesh.construction_helper.InvertibleTransform method) (simudo.mesh.construction_helper.LinearTransform method) update() (simudo.fem.offset_partitioning.PartitionOffsets method) (simudo.util.name_dict.NameDict method) update_input() (simudo.physics.optical.OpticalField method) update_output() (simudo.physics.optical.OpticalField method) update_parameter() (simudo.fem.adaptive_stepper.BaseAdaptiveStepper method) update_parameter_failure_factor (simudo.fem.adaptive_stepper.BaseAdaptiveStepper attribute), [1] (simudo.physics.steppers.OpticalIntensityAdaptiveStepper attribute) (simudo.physics.steppers.VoltageStepper attribute) update_parameter_success_factor (simudo.fem.adaptive_stepper.BaseAdaptiveStepper attribute), [1] (simudo.physics.steppers.OpticalIntensityAdaptiveStepper attribute) (simudo.physics.steppers.VoltageStepper attribute) use_constant_mobility (simudo.physics.poisson_drift_diffusion.IntermediateBand attribute), [1] used_cell_values (simudo.mesh.construction_helper.BaseConstructionHelper attribute)

user_apply_parameter_to_solution() (simudo.fem.adaptive_stepper.AdaptiveStepper method) (simudo.fem.adaptive_stepper.ConstantStepperMixin method) (simudo.physics.steppers.VoltageStepper method) user_define_interval_regions() (simudo.mesh.construction_helper.ConstructionHelperIntervalProduct2DMesh method) (simudo.mesh.construction_helper.ConstructionHelperLayeredStructure method) user_define_mshr_regions() (simudo.mesh.construction_helper.ConstructionHelperMshr method) (simudo.mesh.construction_helper_example.Bob method) user_define_pygmsh_geo() (simudo.mesh.construction_helper.ConstructionHelperPygmsh method) user_extra_definitions() (simudo.mesh.construction_helper.BaseConstructionHelper method) (simudo.mesh.construction_helper_example.Bob method) user_just_generate_mesh() (simudo.mesh.construction_helper.ConstructionHelperManualCellTagging method) user_layer_extra_intervals() (simudo.mesh.construction_helper.ConstructionHelperLayeredStructure method) user_make_solver() (simudo.fem.adaptive_stepper.AdaptiveStepper method) (simudo.physics.steppers.NonequilibriumCoupledStepper method) user_mark_external_boundary_facets() (simudo.mesh.construction_helper.BaseConstructionHelper method) user_modify_meta() (simudo.mesh.construction_helper.BaseConstructionHelper method) user_refinement() (simudo.mesh.construction_helper.BaseConstructionHelper method) (simudo.mesh.construction_helper_example.Bob method) user_solution_add() (simudo.fem.adaptive_stepper.AdaptiveStepper method) (simudo.fem.adaptive_stepper.BaseAdaptiveStepper method) user_solution_save() (simudo.fem.adaptive_stepper.AdaptiveStepper method) (simudo.fem.adaptive_stepper.BaseAdaptiveStepper method) user_solver() (simudo.fem.adaptive_stepper.AdaptiveStepper method) (simudo.fem.adaptive_stepper.BaseAdaptiveStepper method) (simudo.physics.steppers.NonequilibriumCoupledStepper method) user_tag_cell() (simudo.mesh.construction_helper.ConstructionHelperManualCellTagging method) user_tag_cells() (simudo.mesh.construction_helper.ConstructionHelperManualCellTagging method) user_update_solution_vector() (simudo.fem.newton_solver.NewtonSolver method) (simudo.fem.newton_solver.NewtonSolverLogDamping method) (simudo.fem.newton_solver.NewtonSolverMaxDu method) util_define_internal() (simudo.mesh.construction_helper.BaseConstructionHelper method) util_init_cf_from_domains() (simudo.mesh.construction_helper.BaseConstructionHelper method)

V

V (simudo.fem.plot.BaseDolfinFunctionRenderFrame attribute) v_row() (simudo.example.fourlayer.sweep_extraction.SweepData method) vacuum_wavelength() (simudo.physics.optical.OpticalField property) value (simudo.physics.poisson_drift_diffusion.SaveItem attribute) value() (simudo.fem.sympy_dolfin_printer.DolfinConstant property) value_extractor (simudo.fem.spatial.CombinedBoundaryCondition attribute) value_rules (simudo.fem.spatial.Spatial attribute), [1] value_shape (simudo.fem.plot.DolfinFunctionRenderer attribute) ValueRule (class in simudo.fem.spatial) values() (simudo.util.name_dict.NameDict method)

vector_function_to_Expression() (in module simudo.fem.expr) vertices_at_ix() (simudo.mesh.interval1dtag.Product2DMeshMixin.Product2DMesh method) (simudo.mesh.product2d.Product2DMesh method) vertices_at_iy() (simudo.mesh.interval1dtag.Product2DMeshMixin.Product2DMesh method) (simudo.mesh.product2d.Product2DMesh method) voc_row (simudo.example.fourlayer.sweep_extraction.SweepData attribute) voltage_step_plots() (in module simudo.example.marti2002.marti2002_plot) (in module simudo.example.pn_benchmark.pn_benchmark_plot) VoltageStepper (class in simudo.physics.steppers) vth() (simudo.physics.heterojunction.ThermionicHeterojunction property)

W

with_default_kwargs() (in module simudo.util.with_default_kwargs) WithSubfunctionsMixin (class in simudo.fem.function_space)

write_json_meta() (simudo.util.xcsv.XCSVWriter method) write_output() (simudo.io.output_writer.OutputWriter method) writer_class (simudo.util.xcsv.XCSV attribute)

X

xattr() (in module simudo.io.h5yaml) XCSV (class in simudo.util.xcsv) XCSVBase (class in simudo.util.xcsv) XCSVReader (class in simudo.util.xcsv) XCSVWriter (class in simudo.util.xcsv) XdmfPlot (class in simudo.io.xdmf)

XDumper (class in simudo.io.h5yaml) xlistdir() (in module simudo.util.os) XLoader (class in simudo.io.h5yaml) (class in simudo.pyaml.pyaml1) Xs (simudo.fem.plot.DolfinFunctionRenderFrame attribute) xtimeit() (in module simudo.util.xtimeit) XUnitRegistry (class in simudo.util.pint)

Y

yaml_classes (simudo.io.h5yaml.BaseCustomTag attribute) (simudo.io.h5yaml.DolfinFunctionTag attribute) (simudo.io.h5yaml.DolfinMeshFunctionBoolTag attribute) (simudo.io.h5yaml.DolfinMeshFunctionDoubleTag attribute) (simudo.io.h5yaml.DolfinMeshFunctionIntTag attribute) (simudo.io.h5yaml.DolfinMeshFunctionSizetTag attribute) (simudo.io.h5yaml.DolfinMeshTag attribute) (simudo.io.h5yaml.FrozenSetTag attribute) (simudo.io.h5yaml.PintQTag attribute) (simudo.pyaml.pyaml1.BaseCustomTag attribute) yaml_constructors (simudo.io.h5yaml.XLoader attribute) (simudo.pyaml.pyaml1.XLoader attribute) yaml_multi_representers (simudo.io.h5yaml.XDumper attribute)

yaml_tag (simudo.io.h5yaml.BaseCustomTag attribute) (simudo.io.h5yaml.DolfinFunctionTag attribute) (simudo.io.h5yaml.DolfinMeshTag attribute) (simudo.io.h5yaml.FrozenSetTag attribute) (simudo.io.h5yaml.PintQTag attribute) (simudo.pyaml.pyaml1.BaseCustomTag attribute) (simudo.pyaml.pyaml1.YCode2Tag attribute) (simudo.pyaml.pyaml1.YCodeTag attribute) yaml_tag() (simudo.io.h5yaml.BaseDolfinMeshFunctionTag property) YAMLLoader (simudo.pyaml.pyaml1.CodeGenerator attribute) YCode2Tag (class in simudo.pyaml.pyaml1) YCodeTag (class in simudo.pyaml.pyaml1) Ys (simudo.fem.plot.DolfinFunctionRenderFrame attribute)

Z

ZeroAreaWarning